The MIDAS Journal is an Open Access on-line publication covering different domains from Visualization to Image processing.

The unique characteristics of the MIDAS Journal include:

-Open-access to articles and reviews
-Open peer-review that invites discussion between reviewers and authors
-Support for continuous revision of articles, code, and reviews

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Dose Painting with a Variable Collimator for the Small Animal Radiation Research Platform (SARRP)
No opinion
The goal of radiation treatment is to irradiate cancer cells (i.e., a target region) without destroying adjacent healthy tissue. Thus, it is advantageous to form the beam so that it best approximates the target, thereby reducing the amount of dose absorbed in [...]

Deformable Registration with Discontinuity Preservation using Multi-Scale MRF
No opinion
Deformable (2D or 3D) medical image registration is a challenging problem. Existing approaches assume that the underlying deformation is smooth. This smoothness assumption allows for solving the deformable registration at a coarse resolution and interpolate [...]

Brain Tumor Progression Modeling - A Data Driven Approach
No opinion
Malignant gliomas are highly heterogeneous brain tumors with complex an- isotropic growth patterns and occult invasion. Computational modeling of cell migration and proliferation has been subject of intensive research aiming at a deeper understanding of the [...]

On the Importance of Location and Features for the Patch-Based Segmentation of Parotid Glands
No opinion
The segmentation of parotid glands in CT scans of patients with head and neck cancer is an essential part of treatment planning. We introduce a new method for the automatic segmentation of parotid glands that extends existing patch-based approaches in three [...]

InsightToolkit Kinetic Analysis (itk::ka) Library
This paper describes how to compile and use the Insight Toolkit Kinetic Analysis library (itk::ka), to perform analysis of dynamic medical images, along with a brief overview of the library source code. Supplied, are a set of interfaces to facilitate [...]

DICOM Spatial Transform IO in the Insight Toolkit
No opinion
This document describes a module that extends the Insight Toolkit, ITK, which reads DICOM Spatial Rogistration Object files in itk::Transform's. Currently, DICOM files are read by applying the DCMTK library as a backend. An itk::DCMTKTransformIO class can be [...]

Reproducible Research Training at Scipy 2014
No opinion
This article illustrates the process of performing reproducible research with existing open source tools.

Open Source Software to Visualize Complex Data on Remote CEA's Supercomputing Facilities
No opinion
In order to guaranty performances of complex systems using numerical simulation, CEA is performing advanced data analysis and scientific visualization with open source software using High Performance Computing (HPC) capability. The diversity of the physics to [...]

Big Data Analysis and Visualization with Open Source Tools
No opinion
This talk presents the Open-Source toolkits developed by Kitware for big data analysis.

A Flexible Variational Registration Framework
No opinion
In this article, we present an implementation of a flexible framework for non-parametric variational image registration, realized as part of ITK's finite difference solver hierarchy. In a variational registration setting, the transformation is found by [...]

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Publication of the Month
Diffeomorphic Demons Using ITK's Finite Difference Solver Hierarchy
by Vercauteren T., Pennec X., Perchant A., Ayache N.

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Computational Algorithms
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Medical Imaging and Computing
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Most Recent Reviews
Worked very well and was easy to build
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